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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857840.1_cds_XP_016513542.1_26075
CDS Infomation

[gene=LOC107830487] [db_xref=GeneID:107830487] [protein=lignin-forming anionic peroxidase] [protein_id=XP_016513542.1] [location=join(38129..38335,38826..39011,39280..39445,39846..40261)] [gbkey=CDS]
Sequence

ATGTCTTTTTTAAGATTTGTTGGTGCGATTCTTTTCTTGGTTGCAATTTTTGGAGCATCA
AATGCTCAATTAAGTGCAACATTTTATGATACCACTTGCCCTAATGTTACAAGTATTGTA
CGTGGTGTTATGGATCAAAGGCAACGTACTGATGCTCGAGCTGGTGCTAAAATTATTCGT
CTTCATTTCCATGATTGTTTTGTTAATGGTTGTGATGGATCAATTTTGTTAGACACAGAT
GGGACTCAAACTGAGAAAGATGCACCTGCTAATGTAGGTGCAGGAGGATTTGATATTGTG
GATGATATTAAAACTGCACTAGAGAATGTATGCCCTGGTGTTGTATCTTGTGCAGATATT
TTAGCCCTTGCATCTGAAATTGGAGTTGTCTTGGCTAAAGGTCCGTCGTGGCAAGTACTT
TTTGGCAGAAAAGACAGCTTAACAGCAAACCGATCTGGAGCTAATAGTGATATTCCTAGC
CCCTTTGAAACACTTGCTGTAATGATACCACAATTCACCAATAAGGGGATGGATTTAACT
GATCTTGTTGCTCTATCAGGTGCACACACATTTGGAAGAGCAAGATGTGGTACTTTTGAA
CAACGTCTCTTTAACTTCAATGGCAGTGGTAACCCTGATCTAACCGTAGACGCTACGTTT
TTACAAACATTACAAGGAATTTGTCCTCAAGGTGGAAACAATGGCAATACTTTTACAAAT
CTTGATATATCAACACCTAATGATTTTGATAATGACTATTTCACTAATCTTCAAAGTAAT
CAAGGACTTCTTCAAACTGATCAAGAGTTGTTTTCCACATCTGGATCTGCTACAATTGCT
ATAGTTAATCGTTATGCTGGTAGTCAAACTCAGTTTTTTGATGATTTTGTTAGCTCAATG
ATTAAATTGGGTAATATAAGTCCATTAACTGGTACTAACGGACAGATTAGGACAGATTGT
AAGAGGGTTAATTAG

Peptide Sequence

PEP ID

XP_016513542.1
PEP Infomation

PREDICTED: lignin-forming anionic peroxidase [Nicotiana tabacum]
Sequence

MSFLRFVGAILFLVAIFGASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIR
LHFHDCFVNGCDGSILLDTDGTQTEKDAPANVGAGGFDIVDDIKTALENVCPGVVSCADI
LALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLT
DLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTN
LDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSM
IKLGNISPLTGTNGQIRTDCKRVN

Transcript Sequence

Gene sequence data has not been registered.